Publications
9. Amses, K.R., R. Simmons, J.E. Longcore, S.J. Mondo, K. Seto, G. Jeronimo, A. Bonds, C.A. Quandt, W. Davis, Y. Chang, B.A. Federici, A. Kuo, K. LaButti, J. Pangilinan, W. Andreopoulos, A.J. Tritt, R. Riley, H. Hundley, J. Johnson, A. Lipzen, K. Barry, B.F. Lang, C.A. Cuomo, N.E. Buchler, I.V. Grigoriev, J.W. Spatafora, J.E. Stajich, T.Y. James. 2022. Phylogenomic analysis of zoosporic taxa suggests diploid-dominant life cycles characterized the early evolution of Fungi. Proc Natl Acad Sci USA. 119(36):e2116841119. doi: 10.1073/pnas.2116841119.
8. Van Court, R.C., M.S. Wiseman, K.W. Meyer, D.J. Ballhorn, K.R. Amses, J.C. Slot, B.T.M. Dentinger, R. Garibay-Orijel, and J.K. Uehling. 2022. Diversity, biology, and history of psilocybin-containing fungi: Suggestions for research and technological development. Fungal Biol. 126(4):308-319. doi: 10.1016/j.funbio.2022.01.003.
7. Belasen, A.M., K.R. Amses, R.A. Clemons, C. Guilherme Becker, L. Felipe Toledo, and T.Y. James. 2022. Habitat fragmentation in the Brazilian Atlantic Forest is associated with erosion of frog immunogenetic diversity and increased fungal infections. Immunogenetics. 74:1–11. doi: 10.1007/s00251-022-01252-x.
6. Jerônimo, G.H., D.R. Simmons, K.R. Amses, K. Seto, T.Y. James, C.LA. Pires-Zottarelli, and J.E. Longcore. 2022. Phytochytrium and Sparrowiella, two new polycentric genera in Cladochytriales. Mycol Prog. 21:1–9. doi: 10.1007/s11557-022-01791-3.
5. Alors, D., K.R. Amses, T.Y. James, S. Boussiba, A. Zarka. 2022. Paraphysoderma sedebokerense GlnS III is essential for the infection of its host Haematococcus lacustris. J Fungi. 8(6): 561. doi: 10.3390/jof8060561.
4. Amses, K.R., W.J. Davis and T.Y. James. 2020. SCGid: a consensus approach to contig filtering and genome prediction from single cell sequencing libraries of uncultured eukaryotes. Bioinform. 36(7): 1994–2000. doi: 10.1093/bioinformatics/btz866.
3. Davis, W.J., K.R. Amses, G.L. Benny, D. Carter-House, Y. Chang, I. Grigoriev, M.E. Smith, J.W. Spatafora, J.E. Stajich, T.Y. James. 2019. Genome-scale phylogenetics reveals and monophyletic Zoopagales (Zoopagomycota, Fungi). Mol Phylogenet Evol. 133:152–163. doi: 10.1016/j.ympev.2019.01.006.
2. Davis, W.J., K.R. Amses, E.S. James, T.Y. James. 2019. A new 18S phylogeny of uncultured predacious fungi (Zoopagales). Mycologia. 111(2):291–298. doi: 10.1080/00275514.2018.1546066.
1. Smith, M.E., K.R. Amses, T.F. Elliott, K. Obase, M., M.C. Aime, T.W. Henkel. 2015. New sequestrate fungi from Guyana: Jimtrappea guyanensis gen. sp. nov., Castellanea pakaraimophila gen. sp. nov., and Costatisporus cyanescens gen. sp. nov. (Boletaceae, Boletales). IMA Fungus. 6(2):297–317. doi: 10.5598/imafungus.2015.06.02.03.